abstract：:Parechoviruses (PeVs) are highly prevalent viruses worldwide. Over the last decades, several studies have been published on PeV epidemiology in Europe, Asia and North America, while information on other continents is lacking. The aim of this study was to describe PeV circulation in a cohort of children in Malawi, Afri...

journal_title：Archives of virology

authors： Brouwer L,Karelehto E,Han AX,Thomas XV,Bruning AHL,Calis JCJ,van Hensbroek MB,Westerhuis BM,Amarthalingam D,Koekkoek SM,Rebers SPH,Phiri KS,Wolthers KC,Pajkrt D

更新日期：2019-03-01 00:00:00

abstract：:Macrophage (mac)-tropic human immnunodeficiency virus type 1 (HIV-1) and simian immnunodeficiency virus (SIV) in brain are associated with neurological disease. Mac-tropic HIV-1 evolves enhanced CD4 interactions that enable macrophage infection via CD4, which is in low abundance. In contrast, mac-tropic SIV is associa...

journal_title：Archives of virology

authors： Quitadamo B,Peters PJ,Koch M,Luzuriaga K,Cheng-Mayer C,Clapham PR,Gonzalez-Perez MP

更新日期：2019-02-01 00:00:00

abstract：:Hepatitis B virus (HBV) circulates as a collection of genetically related variants that evolve throughout the chronic infection. Those viral variants that have the greatest fitness are fixed. We recently showed different fitness for HBV variants involved in two epidemiological situations. To understand these fitness d...

journal_title：Archives of virology

authors： Sevic I,Elizalde MM,González López Ledesma MM,Flichman DM,Campos RH

更新日期：2019-02-01 00:00:00

abstract：:Occult HCV infection (OCI) has been described as the presence of hepatitis C virus (HCV) genomic RNA in hepatocytes and/or peripheral blood mononuclear cell (PBMC) specimens and the lack of HCV genomic RNA and anti-HCV antibodies (Abs) in plasma samples. Injection drug users (IDUs) are the most important high-risk gro...

journal_title：Archives of virology

authors： Sheikh M,Bokharaei-Salim F,Monavari SH,Ataei-Pirkooh A,Esghaei M,Moradi N,Babaei R,Fakhim A,Keyvani H

更新日期：2019-02-01 00:00:00

abstract：:Big liver and spleen disease, caused by avian hepatitis E virus, has been reported in Poland, but the prevalence of the virus has not yet been investigated. In this study, 1034 serum samples from 57 breeder broiler and laying hen flocks were screened for the presence of anti-aHEV antibodies. In a random serology study...

journal_title：Archives of virology

authors： Matczuk AK,Ćwiek K,Wieliczko A

更新日期：2019-02-01 00:00:00

abstract：:The genus "Tupanvirus" is a new proposed taxon to be included in the family Mimiviridae. The two known tupanvirus isolates were isolated from soda lake and oceanic sediments samples collected in Brazil and were named "tupanvirus soda lake" and "tupanvirus deep ocean", respectively. These viruses exhibit similarities t...

journal_title：Archives of virology

authors： Rodrigues RAL,Mougari S,Colson P,La Scola B,Abrahão JS

更新日期：2019-01-01 00:00:00

abstract：:Oral inoculation of entomopoxvirus spindles, microstructures composed of fusolin protein, causes disruption of the peritrophic matrix (PM), a physical barrier against microbe infection, in the insect midgut. Although the atomic structure of fusolin has been determined, little has been directly elucidated of the mechan...

journal_title：Archives of virology

authors： Mitsuhashi W,Shimura S,Miyamoto K,Sugimoto TN

更新日期：2019-01-01 00:00:00

abstract：:The present study reports the first complete genome sequence analysis of West Nile virus (WNV) strains isolated from brain samples from raptors. The results prove the circulation of closely related WNV lineage II strains in central Europe and genetic analysis revealed seven amino acid substitutions in structural (PrM3...

journal_title：Archives of virology

authors： Drzewnioková P,Barzon L,Franchin E,Lavezzo E,Bakonyi T,Pistl J,Csank T

更新日期：2019-01-01 00:00:00

abstract：:In this study, we describe a novel mycovirus isolated from Trichoderma asperellum, which was designated Trichoderma asperellum dsRNA Virus 1 (TaRV1). The sequence analysis revealed that TaRV1 has two discontinuous open reading frames (ORF), ORF1 and ORF2. A hypothetical protein and an RNA-dependent RNA polymerase are ...

journal_title：Archives of virology

authors： Zhang T,Zeng X,Cai X,Liu H,Zeng Z

更新日期：2018-12-01 00:00:00

abstract：:We detected a novel feline stool-associated circular DNA virus (FeSCV) in fecal samples from cats with diarrhea using consensus primers matching those of circovirus and cyclovirus. FeSCV is a circular DNA virus containing a genome with a total length of 2,046 nt encoding 2 open reading frames. Phylogenetic analyses in...

journal_title：Archives of virology

authors： Takano T,Yanai Y,Hiramatsu K,Doki T,Hohdatsu T

更新日期：2018-12-01 00:00:00

abstract：:Severe fever with thrombocytopenia syndrome (SFTS) is an emerging infectious disease caused by the SFTS virus (SFTSV). Hubei Province is a major epidemic area for SFTS in China. In this study, quantitative reverse-transcription polymerase chain reaction (qRT-PCR) and serological testing (IgM) were used simultaneously ...

journal_title：Archives of virology

authors： Hu B,Cai K,Liu M,Li W,Xu J,Qiu F,Zhan J

更新日期：2018-12-01 00:00:00

abstract：:Broadly neutralizing antibodies (bNAbs) are very promising agents for HIV-1 prophylaxis and AIDS treatment. However, the neutralization susceptibility of circulating recombinants such as CRF01_AE, which is becoming increasingly prevalent, has not been studied in detail until now. Here, we focused on CRF01_AE in China ...

journal_title：Archives of virology

authors： Wang H,Yuan T,Li T,Li Y,Qian F,Zhu C,Liang S,Hoffmann D,Dittmer U,Sun B,Yang R

更新日期：2018-12-01 00:00:00

abstract：:Pigeon circovirus (PiCV) is taxonomically classified as a member of the Circovirus genus, family Circoviridae. The virus contains a single stranded DNA genome of approximately 2 kb, with minor length variations among different isolates. The occurrence of PiCV infections in pigeons (Columba livia) has been documented w...

journal_title：Archives of virology

authors： Loiko MR,Junqueira DM,Varela APM,Tochetto C,Scheffer CM,Lima DA,Morel AP,Cerva C,Paim WP,Mayer FQ,Roehe PM

更新日期：2018-11-01 00:00:00

abstract：:Histamine is a biogenic amine that influences many immune cells. In this study, we investigated the effect of histamine on the pathogenesis of 2009 pandemic H1N1 influenza virus in pigs. Histamine was not detected in the tracheal tissues of infected pigs, and no difference was found in the pathological damage found in...

journal_title：Archives of virology

authors： Jang Y,Jin M,Seo SH

更新日期：2018-11-01 00:00:00

abstract：:Mitochondrial movement and distribution throughout the cytoplasm is crucial for maintaining cell homeostasis. Mitochondria are dynamic organelles but can be functionally disrupted during infection. Here, we show that the ubiquitous human pathogens HHV-1 and HHV-2 induce changes in the mitochondrial morphology and dist...

journal_title：Archives of virology

authors： Chodkowski M,Serafińska I,Brzezicka J,Golke A,Słońska A,Krzyżowska M,Orłowski P,Bąska P,Bańbura MW,Cymerys J

更新日期：2018-10-01 00:00:00

abstract：:RNA viruses are classified by their genome polarity and replication strategies. Nucleotide composition and codon usage differ among virus groups, for instance positive-sense RNA (+ssRNA) viruses have higher GC-content than the other RNA virus groups. Codon usage of +ssRNA viruses is closer to humans showing significan...

journal_title：Archives of virology

authors： Phakaratsakul S,Sirihongthong T,Boonarkart C,Suptawiwat O,Auewarakul P

更新日期：2018-10-01 00:00:00

abstract：:To investigate the genetic diversity of porcine reproductive and respiratory syndrome virus (PRRSV) in Northern Ireland, the ORF5 gene from nine field isolates was sequenced and phylogenetically analysed. The results revealed relatively high diversity amongst isolates, with 87.6-92.2% identity between farms at the nuc...

journal_title：Archives of virology

authors： Smith N,Power UF,McKillen J

更新日期：2018-10-01 00:00:00

abstract：:The high prevalence (14.3%) of HIV/HBV co-infections reported in west China makes it necessary to screen concurrent HBV infection in HIV carriers. HBV B genotype was shown to be dominant in 54 cases of HIV/HBV co-infection, accounting for 81.48% of the total. The total drug resistance rate observed was 3.70%. A1762T, ...

journal_title：Archives of virology

authors： Li D,Chen Q,Tao C

更新日期：2018-10-01 00:00:00

abstract：:Nanoviruses and geminiviruses are circular, single stranded DNA viruses that infect many plant species around the world. Nanoviruses and certain geminiviruses that belong to the Begomovirus and Mastrevirus genera are associated with additional circular, single stranded DNA molecules (~ 1-1.4 kb) that encode a replicat...

journal_title：Archives of virology

authors： Briddon RW,Martin DP,Roumagnac P,Navas-Castillo J,Fiallo-Olivé E,Moriones E,Lett JM,Zerbini FM,Varsani A

更新日期：2018-09-01 00:00:00

abstract：:Strawberry crinkle disease is one of the major diseases that threatens strawberry production. Although the biological properties of the agent, strawberry crinkle virus (SCV), have been thoroughly investigated, its complete genome sequence has never been published. Existing RT-PCR-based detection relies on a partial se...

journal_title：Archives of virology

authors： Koloniuk I,Fránová J,Sarkisova T,Přibylová J

更新日期：2018-09-01 00:00:00

abstract：:Respiratory syncytial virus (RSV) is the most frequently identified viral agent in infants, children, and elderly people with acute respiratory tract infections (ARTIs). This study is the only one of its kind in Kuwait, and its purpose was to investigate the genetic variability of the G protein gene in RSV strains pre...

journal_title：Archives of virology

authors： Madi N,Chehadeh W,Asadzadeh M,Al-Turab M,Al-Adwani A

更新日期：2018-09-01 00:00:00

abstract：:Enterovirus 71 (EV71) is one of the most common pathogens of hand, foot, and mouth disease (HFMD). A rapid reverse transcription recombinase polymerase amplification (RT-RPA) assay was established to detect EV71 subgenotype C4 (EV71-C4). The 95% detection limit of the RT-RPA was 3.767 log10 genomic copies (LGC)/reacti...

journal_title：Archives of virology

authors： Yin D,Zhu Y,Wang K,Wang J,Zhang X,Han M,He Y,Chen Q,Hu G

更新日期：2018-09-01 00:00:00

abstract：:The DECS (dsRNA isolation, exhaustive amplification, cloning and sequencing) analysis technique for viral diagnosis detected a tombusvirus in Japanese gentian not displaying severe symptoms. We tentatively named this virus "gentian virus A" (GeVA). GeVA systemically but inefficiently infected Japanese gentian without ...

journal_title：Archives of virology

authors： Fujisaki K,Tateda C,Shirakawa A,Iwai M,Abe Y

更新日期：2018-09-01 00:00:00

abstract：:During aetiological study of diseased red clover (Trifolium pratense L.) using high throughput sequencing, a novel virus with a 10 kb genome divided into two segments was discovered. The virus, tentatively named red clover associated varicosavirus (RCaVV), is phylogenetically related to classifiable members of the gen...

journal_title：Archives of virology

authors： Koloniuk I,Fránová J,Sarkisova T,Přibylová J,Lenz O,Petrzik K,Špak J

更新日期：2018-08-01 00:00:00

abstract：:In order to improve current understanding of the molecular epidemiology of avian avulavirus 1 (AAvV-1, formerly avian paramyxovirus 1) in wild birds in Kazakhstan, 860 cloacal swab samples were evaluated. Samples were collected from 37 families of wild birds in nine different regions in the years 2011 and 2014. Overal...

journal_title：Archives of virology

authors： Orynbayev MB,Fereidouni S,Sansyzbai AR,Seidakhmetova BA,Strochkov VM,Nametov AM,Sadikaliyeva SO,Nurgazieva A,Tabynov KK,Rametov NM,Sultankulova KT

更新日期：2018-07-01 00:00:00

abstract：:Mycobacteriophage archival stocks have been kept for ca. 20-50 years in Japan. In this study, we attempted to recover mycobacteriophages from 50 archival stocks and briefly analyzed the recovered phages. The phages were recovered from 72.2% (13/18) of the lyophilized stocks that had been stored for 47-56 years. Moreov...

journal_title：Archives of virology

authors： Ujihara T,Uchiyama J,Nasukawa T,Ando H,Murakami H,Ohara N,Ogawa M,Yamazaki T,Daibata M,Sakaguchi M,Matsuzaki S

更新日期：2018-07-01 00:00:00

abstract：:A novel iflavirus, tentatively named "Sogatella furcifera honeydew virus 1" (SFHV1), discovered through transcriptome sequencing analysis of white-backed planthoppers (Sogatella furcifera) collected in southern China, is described here. The full genome of SFHV1 is 10,837 nucleotides (nt) long, including the polyA tail...

journal_title：Archives of virology

authors： Wu N,Zhang P,Liu W,Cao M,Wang X

更新日期：2018-07-01 00:00:00

abstract：:The combined use of phage and antibiotics can show synergistic antimicrobial effects, so-called phage-antibiotic synergy (PAS). Here, we screened and examined PAS against Pseudomonas aeruginosa in vitro. Testing four different phages infecting P. aeruginosa, phage KPP22 classified within the family Myoviridae genus Pb...

journal_title：Archives of virology

authors： Uchiyama J,Shigehisa R,Nasukawa T,Mizukami K,Takemura-Uchiyama I,Ujihara T,Murakami H,Imanishi I,Nishifuji K,Sakaguchi M,Matsuzaki S

更新日期：2018-07-01 00:00:00

abstract：:Porcine astrovirus (PAstV) is widely distributed and highly prevalent among pigs, nevertheless its clinical significance remains unclear as it can be detected in both diarrheic and in healthy pigs. Information about the prevalence, clinical significance and molecular characterization of PAstV in Thailand is not availa...

journal_title：Archives of virology

authors： Kumthip K,Khamrin P,Saikruang W,Kongkaew A,Vachirachewin R,Ushijima H,Maneekarn N

更新日期：2018-07-01 00:00:00

abstract：:Allexiviruses are economically important garlic viruses that are involved in garlic mosaic diseases. In this study, we characterized the allexivirus cysteine-rich protein (CRP) gene located just downstream of the coat protein (CP) gene in the viral genome. We determined the nucleotide sequences of the CP and CRP genes...

journal_title：Archives of virology

authors： Yoshida N,Shimura H,Masuta C

更新日期：2018-06-01 00:00:00

abstract：:Emilia sonchifolia is a traditionally used medicinal plant that is widespread in tropical and subtropical regions of the world. Yellow vein symptoms were observed in E. sonchifolia plants in fields in the county of Koh Samui, Surat Thani Province, Thailand, in August 2015. Two distinct begomoviruses, designated TH4872...

journal_title：Archives of virology

authors： Zhao L,Zhong J,Zhang X,Yin Y,Li T,Ding M

更新日期：2018-06-01 00:00:00

abstract：:In this study, an Escherichia coli virulent phage, SRT8, was isolated from sewage sludge samples collected from Jinan, Shandong Province, China. The genome of phage SRT8 consists of 49,579 bp with 47.83% G+C content. The phage genome contains 84 putative protein-coding genes, and no rRNA or tRNA genes. Comparative gen...

journal_title：Archives of virology

authors： Zhao K,Song S,Zhao Z,Gu P,Fan X,Li Q

更新日期：2018-06-01 00:00:00

abstract：:Next-generation sequencing of small RNAs and PCR amplification with two pairs of back-to-back primers, followed by cloning and sequencing, allowed identification of a novel geminivirus isolate provisionally named camellia chlorotic dwarf-associated virus (CaCDaV). The complete genome sequence of CaCDaV comprises 3,687...

journal_title：Archives of virology

authors： Zhang S,Shen P,Li M,Tian X,Zhou C,Cao M

更新日期：2018-06-01 00:00:00

abstract：:To establish an animal model for the newly identified Marmota Himalayana hepatovirus, MHHAV, so as to develop a better understanding of the infection of hepatitis A viruses. Five experimental woodchucks (Marmota monax) were inoculated intravenously with the purified MHHAV from wild woodchuck feces. One animal injected...

journal_title：Archives of virology

authors： Yu JM,Li LL,Xie GC,Zhang CY,Ao YY,Duan ZJ

更新日期：2018-05-01 00:00:00

abstract：:In this study, bovine enteric caliciviruses (BECs) were detected in 49.4% of a total of 253 stool specimens for diarrheic calves collected from 42 industrial dairy farms from March 2010 to February 2012. Genogroup III norovirus (NoVsGIII) were more prevalent (39.5%) than neboviruses (NBs) (15%), and coinfections were ...

journal_title：Archives of virology

authors： Pourasgari F,Kaplon J,Sanchooli A,Fremy C,Karimi-Naghlani S,Otarod V,Ambert-Balay K,Mojgani N,Pothier P

更新日期：2018-05-01 00:00:00

abstract：:In this study, we isolated a novel avian reovirus (ARV) strain, K738/14, from a broiler chicken with viral arthritis in South Korea. Genome sequence comparisons showed relatively low nucleotide identity with previously identified ARV strains. Phylogenetic analyses suggested multiple reassortment events between reoviru...

journal_title：Archives of virology

authors： Noh JY,Lee DH,Lim TH,Lee JH,Day JM,Song CS

更新日期：2018-05-01 00:00:00

abstract：:The complete sequence of a narcissus virus isolated from the Netherlands (Narv-NL) was determined to be 8172 nucleotides in length with an open reading frame encoding for 2624 amino acids. Phylogenetic analysis indicates that Narv-NL is clustered with high confidence among representative members from the genus Maclura...

journal_title：Archives of virology

authors： Gao F,Shen J,Liao F,Cai W,Lin S,Yang H,Chen S

更新日期：2018-05-01 00:00:00

abstract：:Infection of soybean by the plant cytorhabdovirus soybean blotchy mosaic virus (SbBMV) results in significant yield losses in the temperate, lower-lying soybean production regions of South Africa. A 277 bp portion of the RNA-dependent RNA polymerase gene of 66 SbBMV isolates from different: hosts, geographical locatio...

journal_title：Archives of virology

authors： Strydom E,Pietersen G

更新日期：2018-05-01 00:00:00

abstract：:Viruses represent some of the deadliest pathogens known to science. Recently they have been reported to have mutualistic interactions with their hosts, providing them direct or indirect benefits. The mutualism and symbiogenesis of such viruses with lower eukaryotic partners such as fungi, yeast, and insects have been ...

journal_title：Archives of virology

authors： Jagdale SS,Joshi RS

更新日期：2018-04-01 00:00:00

abstract：:An F35L mutation in the N-terminal domain of the polymerase acidic protein (PA-Nter), which contains the active site of the endonuclease, has been reported to result in higher polymerase activity in mouse-adapted strains of the 2009 pandemic influenza A H1N1 virus. We modeled wild and mutant complexes of uridine 5'-mo...

journal_title：Archives of virology

authors： Bhoye D,Cherian SS

更新日期：2018-04-01 00:00:00